Gene
arid4a
- ID
- ZDB-GENE-050809-105
- Name
- AT-rich interactive domain 4A
- Symbol
- arid4a Nomenclature History
- Previous Names
-
- fc43f03
- fi11g07
- fi14h03
- wu:fc43f03
- wu:fi06c05
- wu:fi11g07
- wu:fi14h03
- zgc:110391 (1)
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Predicted to have transcription regulatory region DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ARID4A (AT-rich interaction domain 4A).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7159240 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001606 | ARID DNA-binding domain |
Domain | IPR002999 | Tudor domain |
Domain | IPR012603 | ARID4A/B, PWWP domain |
Domain | IPR025995 | RNA binding activity-knot of a chromodomain |
Domain | IPR047472 | ARID4A, first Tudor domain |
Domain | IPR047473 | ARID4A, chromo barrel domain |
Homologous_superfamily | IPR016197 | Chromo-like domain superfamily |
Homologous_superfamily | IPR036431 | ARID DNA-binding domain superfamily |
Domain Details Per Protein
Protein | Length | ARID4A/B, PWWP domain | ARID4A, chromo barrel domain | ARID4A, first Tudor domain | ARID DNA-binding domain | ARID DNA-binding domain superfamily | Chromo-like domain superfamily | RNA binding activity-knot of a chromodomain | Tudor domain |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:Q499A1
|
1196 | ||||||||
UniProtKB:A0A8M2B539
|
1332 |
Type | Name | Length (nt) | Analysis |
---|---|---|---|
lincRNA |
ottdart00000059129
(1)
|
540 nt | |
mRNA |
arid4a-201
(1)
|
3687 nt | |
mRNA |
arid4a-202
(1)
|
2172 nt | |
mRNA |
arid4a-204
(1)
|
5727 nt |
Interactions and Pathways
No data available
Plasmids
No data available