Gene

pcdh1g3

ID
ZDB-GENE-050608-3
Name
protocadherin 1 gamma 3
Symbol
pcdh1g3 Nomenclature History
Previous Names
  • DrPcdh1ga3 (1)
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to act upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in brain. Orthologous to several human genes including PCDHGB1 (protocadherin gamma subfamily B, 1); PCDHGB2 (protocadherin gamma subfamily B, 2); and PCDHGB3 (protocadherin gamma subfamily B, 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
CRISPR1-pcdh1g
    Tsai et al., 2020
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    Human Disease
    Associated With pcdh1g3 Human Ortholog
    No data available
    Associated With pcdh1g3 Via Experimental Models
    No data available
    Gene Ontology
    Protein Domains
    Domain, Family, and Site Summary
    Type InterPro ID Name
    Conserved_site IPR020894 Cadherin conserved site
    Domain IPR002126 Cadherin-like
    Domain IPR013164 Cadherin, N-terminal
    Domain IPR031904 Cadherin, C-terminal catenin-binding domain
    Domain IPR032455 Cadherin, cytoplasmic C-terminal domain
    1 - 5 of 7 Show all
    Domain Details Per Protein
    Protein Length Cadherin conserved site Cadherin, C-terminal catenin-binding domain Cadherin, cytoplasmic C-terminal domain Cadherin-like Cadherin-like superfamily Cadherin, N-terminal Protocadherin/Cadherin-related Cell Adhesion
    UniProtKB:I6LC19 939
    1 - 1 of 1
    Transcripts
    Genome Browsers
    Genome Build: GRCz11Chromosome: 10
    Type Name Annotation Method Has Havana Data Length (nt) Analysis
    mRNA pcdh1g3-201 (1) Ensembl 4,374 nt
    1 - 1 of 1
    Interactions and Pathways
    No data available
    Antibodies
    No data available
    Plasmids
    No data available
    Constructs
    No data available
    Marker Relationships
    Relationship Marker Type Marker Accession Numbers Citations
    Contained inBACDKEY-17C10ZFIN Curated Data
    Contained inBACDKEY-179G5ZFIN Curated Data
    Contained inBACDKEY-263M6ZFIN Curated Data
    EncodescDNAMGC:193512ZFIN Curated Data
    1 - 4 of 4
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    Sequences
    Something went wrong fetching data. Try again later or contact us.
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    No data available
    Citations
    1 - 6 of 6
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