ZFIN ID: ZDB-GENE-050522-559
Gene Name: cathepsin Sb, tandem duplicate 1
Gene Symbol: ctssb.1
Previous Names: zf-a41, fc38f10, fc47h06, im:6797184, ns:zf-a41, wu:fc38f10, wu:fc47h06, wu:fi17f10, zgc:112226, zgc:112369, zgc:123302
Location: Chr: 16   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 2 from Gao et al., 2014
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ctssb.1 HUMAN ORTHOLOG No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process proteolysis (more)
Cellular Component extracellular space (more)
Molecular Function cysteine-type peptidase activity (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000169 (1)
  • InterPro:IPR000668 (1)
  • InterPro:IPR013128 (1)
  • InterPro:IPR013201 (1)
  • InterPro:IPR025660 (1)
  • InterPro:IPR025661 (1)
  • PROSITE:PS00139 (1)
  • PROSITE:PS00639 (1)
  • PROSITE:PS00640 (1)
  • Pfam:PF00112 (1)
  • Pfam:PF08246 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ctssb.1-001 (1) 1227
    ncRNA ctssb.1-002 (1) 803
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ctssb.1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ctssb.1 Contained in: [BAC] CH211-113G11 (1) (order this), DKEY-30O16 (1) (order this)
    ctssb.1 Contains: [SNP] rs3728791 (1), rs3728792 (1), rs3728793 (1), rs3728794 (1), rs3728795 (1), rs3728796 (1), rs3728797 (1)
    ctssb.1 Encodes: [EST] fc38f10, fc47h06, fi17f10 (1), IMAGE:6797184 (1), zf-a41
    [cDNA] MGC:112226 (1), MGC:112369 (1) (order this), MGC:123302 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024409 (1) 1244 bp
    Genomic GenBank:BX248517 (1) 201353 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q502A6 (1) 330 aa
    Sequence Clusters UniGene:75553 (1)
    Sequence Information (all 30)
    OTHER ctssb.1 GENE PAGES
  • Gene:554157 (1)
  • VEGA:OTTDARG00000034140 (1)
  • Ensembl(Zv9):ENSDARG00000074656 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish ctssb.1 16  
    Human CTSS 1 (1q21)
  • OMIM:116845
  • Gene:1520
  • Mouse Ctss 3 ( 40.74 cM)
  • MGI:107341
  • Gene:13040
  • Orthology Details
    Orthology Note
    CITATIONS (22)