Gene

tma16

ID

ZDB-GENE-050522-20

Name

translation machinery associated 16 homolog

Symbol

tma16 Nomenclature History

Previous Names

zgc:110664

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to enable preribosome binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within ribosome biogenesis. Predicted to be active in nucleus. Orthologous to human TMA16 (translation machinery associated 16 homolog).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:110664 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tma16 Human Ortholog

No data available

Associated With tma16 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR021346	Translation machinery-associated protein 16
Homologous_superfamily	IPR038356	Tma16 superfamily

Domain Details Per Protein

Protein	Length	Tma16 superfamily	Translation machinery-associated protein 16
UniProtKB:B8A4V8 InterPro	194
UniProtKB:A7MCB7 InterPro	194

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	tma16-201 (1) Ensembl	Ensembl		2,101 nt	Select Tool ZFIN BLAST
ncRNA	tma16-002 (1) Ensembl	Ensembl		858 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations