Gene
alkbh1
- ID
- ZDB-GENE-050522-196
- Name
- alkB homolog 1, histone H2A dioxygenase
- Symbol
- alkbh1 Nomenclature History
- Previous Names
-
- si:ch211-133l14.1
- zgc:112365
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Predicted to have oxidoreductase activity. Predicted to be involved in oxidation-reduction process. Predicted to localize to mitochondrion and nuclear euchromatin. Orthologous to human ALKBH1 (alkB homolog 1, histone H2A dioxygenase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR005123 | Oxoglutarate/iron-dependent dioxygenase domain |
| Domain | IPR027450 | Alpha-ketoglutarate-dependent dioxygenase AlkB-like |
| Family | IPR004574 | Alkylated DNA repair protein AlkB |
| Homologous_superfamily | IPR037151 | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily |
Domain Details Per Protein
| Protein | Length | Alkylated DNA repair protein AlkB | Alpha-ketoglutarate-dependent dioxygenase AlkB-like | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily | Oxoglutarate/iron-dependent dioxygenase domain |
|---|---|---|---|---|---|
|
UniProtKB:A0A8M2B5M4
|
329 | ||||
|
UniProtKB:Q502A8
|
363 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
alkbh1-202
(1)
|
Ensembl | 1,032 nt | ||
| mRNA |
alkbh1-201
(1)
|
Ensembl | 1,214 nt |
Interactions and Pathways
No data available
Plasmids
No data available