Gene

abt1

ID
ZDB-GENE-050522-127
Name
activator of basal transcription 1
Symbol
abt1 Nomenclature History
Previous Names
  • im:7139827
  • zgc:109995
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to localize to nucleolus. Orthologous to human ABT1 (activator of basal transcription 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With abt1 Human Ortholog
No data available
Associated With abt1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR034353 ABT1/ESF2, RNA recognition motif
Family IPR039119 ABT1/Esf2
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length ABT1/Esf2 ABT1/ESF2, RNA recognition motif Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily
UniProtKB:Q503Z6 305
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA abt1-201 (1) Ensembl 1,415 nt
mRNA abt1-202 (1) Ensembl 771 nt
mRNA abt1-203 (1) Ensembl 1,411 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations