Gene
scaf4b
- ID
- ZDB-GENE-050506-42
- Name
- SR-related CTD-associated factor 4b
- Symbol
- scaf4b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to have RNA binding activity. Orthologous to human SCAF4 (SR-related CTD associated factor 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:6900467 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Fliedner-Zweier syndrome | 620511 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR006569 | CID domain |
| Family | IPR051485 | SR-related and CTD-associated factor |
| Homologous_superfamily | IPR008942 | ENTH/VHS |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Length | CID domain | ENTH/VHS | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | SR-related and CTD-associated factor |
|---|---|---|---|---|---|---|---|
|
UniProtKB:R4GE22
|
905 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
scaf4b-201
(1)
|
Ensembl | 2,350 nt | ||
| mRNA |
scaf4b-204
(1)
|
Ensembl | 3,473 nt | ||
| ncRNA |
scaf4b-002
(1)
|
Ensembl | 863 nt | ||
| ncRNA |
scaf4b-003
(1)
|
Ensembl | 599 nt |
Interactions and Pathways
No data available
Plasmids
No data available