Gene

stard13b

ID

ZDB-GENE-050506-146

Name

StAR related lipid transfer domain containing 13b

Symbol

stard13b Nomenclature History

Previous Names

im:7147988

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have lipid binding activity. Predicted to be involved in signal transduction. Orthologous to human STARD13 (StAR related lipid transfer domain containing 13).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7147988 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With stard13b Human Ortholog

No data available

Associated With stard13b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000198	Rho GTPase-activating protein domain
Domain	IPR001660	Sterile alpha motif domain
Domain	IPR002913	START domain
Homologous_superfamily	IPR008936	Rho GTPase activation protein
Homologous_superfamily	IPR013761	Sterile alpha motif/pointed domain superfamily
Homologous_superfamily	IPR023393	START-like domain superfamily

Domain Details Per Protein

Protein	Length	Rho GTPase-activating protein domain	Rho GTPase activation protein	START domain	START-like domain superfamily	Sterile alpha motif domain	Sterile alpha motif/pointed domain superfamily
UniProtKB:A0A8M2B4H2 InterPro	1110
UniProtKB:A0A8M2B3U3 InterPro	1073
UniProtKB:A0A2R8QSF6 InterPro	1123
UniProtKB:E7F8B8 InterPro	1487
UniProtKB:A0A8M3AQ23 InterPro	1007

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	stard13b-201 (1) Ensembl	Ensembl	710 nt	Select Tool ZFIN BLAST
mRNA	stard13b-202 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST
mRNA	stard13b-203 (1) Ensembl	Ensembl	5,770 nt	Select Tool ZFIN BLAST
mRNA	stard13b-204 (1) Ensembl	Ensembl	3,372 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations