Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-050309-289
Gene Name: SET domain containing 1B, a
Gene Symbol: setd1ba
Previous Names: im:7156157, si:dkey-237o15.4
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 2 figures (3 images) from Thisse et al., 2004 [IMAGE:7156157]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  cerebellum
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa12989, sa13004
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chromatin modification (more)
Cellular Component chromosome (more)
Molecular Function RNA binding (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR001214 (1)
  • InterPro:IPR003616 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR015722 (1)
  • InterPro:IPR024657 (1)
  • PROSITE:PS50102 (1)
  • PROSITE:PS50280 (1)
  • PROSITE:PS50868 (1)
  • Pfam:PF00076 (1)
  • Pfam:PF00856 (1)
  • Pfam:PF11764 (1)
  • EC:2.1.1.43 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA setd1ba-001 (1) 5953
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM setd1ba No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    setd1ba Contained in: [BAC] CH211-265M20 (1) (order this), DKEY-237O15 (1)
    setd1ba Encodes: [EST] IMAGE:7156157 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045134 (1) 8154 bp
    Genomic GenBank:BX005309 (1) 179240 bp
    Select Tool
    Polypeptide UniProtKB:F1Q6L6 (1) 1844 aa
    Sequence Clusters UniGene:80156 (1)
    Sequence Information (all 20)
    OTHER setd1ba GENE PAGES
  • Gene:567970 (1)
  • VEGA:OTTDARG00000023719 (1)
  • Ensembl(Zv9):ENSDARG00000060847 (1)
  • MAPPING INFORMATION
    Chr: 10 Details
    ORTHOLOGY
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish setd1ba 10  
    Human SETD1B 12 (12q24.31)
  • OMIM:611055
  • Gene:23067
  • Mouse Setd1b 5 ( 62.80 cM)
  • MGI:2652820
  • Gene:208043
  • CITATIONS (17)