Gene

lsm11

ID
ZDB-GENE-050309-124
Name
LSM11, U7 small nuclear RNA associated
Symbol
lsm11 Nomenclature History
Previous Names
  • im:7149708
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have U7 snRNA binding activity. Predicted to be involved in mRNA 3'-end processing by stem-loop binding activity and cleavage. Predicted to localize to U7 snRNP. Orthologous to human LSM11 (LSM11, U7 small nuclear RNA associated).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lsm11 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Aicardi-Goutieres syndrome 8 619486
Associated With lsm11 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001163 Sm domain, eukaryotic/archaea-type
Domain IPR034109 Sm-like protein Lsm11, middle domain
Family IPR039267 U7 snRNA-associated Sm-like protein Lsm11
Homologous_superfamily IPR010920 LSM domain superfamily
Domain Details Per Protein
Protein Length LSM domain superfamily Sm domain, eukaryotic/archaea-type Sm-like protein Lsm11, middle domain U7 snRNA-associated Sm-like protein Lsm11
UniProtKB:A0A8M6Z9X5 403
UniProtKB:E9QIK5 328
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lsm11-201 (1) Ensembl 1,118 nt
ncRNA lsm11-002 (1) Ensembl 936 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations