ZFIN ID: ZDB-GENE-041210-245
Gene Name: nucleoporin 107
Gene Symbol: nup107

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Previous Names: si:dkey-27k7.3 (1), zgc:152723

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7152148]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7150867]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  head, intestine, unspecified, whole organism
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 3 figures from 2 publications
Observed in: eye, glomerular capillary, intestine, pharynx (all 8) expand
DISEASE ASSOCIATED WITH nup107 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Nephrotic syndrome, type 11 616730
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA export from nucleus (more)
Cellular Component nuclear pore (more)
Molecular Function nucleocytoplasmic transporter activity (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007252 (1)
  • Pfam:PF04121 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nup107-001 (1) 2953
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nup107 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    nup107Contained in: [BAC] DKEY-27K7 (1) (order this)
    nup107Encodes: [EST] IMAGE:7150867 (1) (order this), IMAGE:7152148 (1) (order this)
    [cDNA] MGC:152723 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030167 (1) 2953bp
    Genomic GenBank:BX897665 (1) 129995bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IJT3 (1) 920aa
    Sequence Clusters UniGene:48434 (1)
    Sequence Information (all 16)
    OTHER nup107 GENE PAGES
  • Gene:562350 (1)
  • VEGA:OTTDARG00000009311 (1)
  • Ensembl(GRCz10):ENSDARG00000016010 (1)
  • ORTHOLOGY for nup107 (Chr: 4)
    CITATIONS (27)