Gene

lrrc20

ID

ZDB-GENE-041114-49

Name

leucine rich repeat containing 20

Symbol

lrrc20 Nomenclature History

Previous Names

zgc:103699

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Orthologous to human LRRC20 (leucine rich repeat containing 20).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lrrc20 Human Ortholog

No data available

Associated With lrrc20 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR050216	Leucine-rich repeat domain-containing protein
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Repeat	IPR001611	Leucine-rich repeat

Domain Details Per Protein

Protein	Length	Leucine-rich repeat	Leucine-rich repeat domain-containing protein	Leucine-rich repeat domain superfamily
UniProtKB:A0A8M9PW68 InterPro	184
UniProtKB:A0A8M9Q8A6 InterPro	172
UniProtKB:A0A8M2BKA8 InterPro	179
UniProtKB:A0A8M9QMF3 InterPro	201
UniProtKB:Q5U3D7 InterPro	167
UniProtKB:A0A0R4IPB8 InterPro	167
UniProtKB:A0A8M9QIM2 InterPro	196

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	lrrc20-201 (1) Ensembl	Ensembl		1,096 nt	Select Tool ZFIN BLAST
mRNA	lrrc20-202 (1) Ensembl	Ensembl		810 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations