Gene

rundc3b

ID

ZDB-GENE-041114-121

Name

RUN domain containing 3b

Symbol

rundc3b Nomenclature History

Previous Names

zgc:101561 (1)

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Is expressed in brain; gut; habenula; and yolk syncytial layer. Orthologous to human RUNDC3B (RUN domain containing 3B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:101561 (10 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rundc3b Human Ortholog

No data available

Associated With rundc3b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR004012	RUN domain
Domain	IPR047339	RUN domain-containing protein 3B, RUN domain
Family	IPR047340	RUN domain-containing protein 3A/B
Homologous_superfamily	IPR037213	RUN domain superfamily

Domain Details Per Protein

Protein	Length	RUN domain	RUN domain-containing protein 3A/B	RUN domain-containing protein 3B, RUN domain	RUN domain superfamily
UniProtKB:B2GSN6 InterPro	450
UniProtKB:Q5U3W3 InterPro	450

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	rundc3b-201 (1) Ensembl	Ensembl		1,819 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations