Gene

wdfy1

ID
ZDB-GENE-041024-4
Name
WD repeat and FYVE domain containing 1
Symbol
wdfy1 Nomenclature History
Previous Names
  • zgc:101764
  • zgc:109909
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Orthologous to human WDFY1 (WD repeat and FYVE domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With wdfy1 Human Ortholog
No data available
Associated With wdfy1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR000306 FYVE zinc finger
Domain IPR017455 Zinc finger, FYVE-related
Domain IPR042733 WDFY1, FYVE domain
Family IPR042234 WD repeat and FYVE domain-containing protein 1/2
Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
Domain Details Per Protein
Protein Length FYVE zinc finger G-protein beta WD-40 repeat WD40 repeat WD40 repeat, conserved site WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily WDFY1, FYVE domain WD repeat and FYVE domain-containing protein 1/2 Zinc finger, FYVE/PHD-type Zinc finger, FYVE-related Zinc finger, RING/FYVE/PHD-type
UniProtKB:Q4VBV0 410
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA wdfy1-201 (1) Ensembl 1,794 nt
mRNA wdfy1-202 (1) Ensembl 238 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations