Gene

fbxo16

ID

ZDB-GENE-041015-747

Name

F-box protein 16

Symbol

fbxo16 Nomenclature History

Previous Names

si:ch211-89p3.1
zgc:112464

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Is expressed in Kupffer's vesicle; hypothalamus; neural tube; and spinal cord. Orthologous to human FBXO16 (F-box protein 16).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6899114 (7 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With fbxo16 Human Ortholog

No data available

Associated With fbxo16 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001810	F-box domain
Family	IPR052805	GEF and Ubiquitin-Proteasome Regulators
Homologous_superfamily	IPR036047	F-box-like domain superfamily

Domain Details Per Protein

Protein	Length	F-box domain	F-box-like domain superfamily	GEF and Ubiquitin-Proteasome Regulators
UniProtKB:Q566U8 InterPro	348

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	fbxo16-201 (1) Ensembl	Ensembl	1,865 nt	Select Tool
mRNA	fbxo16-202 (1) Ensembl	Ensembl	1,815 nt	Select Tool ZFIN BLAST
mRNA	fbxo16-203 (1) Ensembl	Ensembl	821 nt	Select Tool
mRNA	fbxo16-204 (1) Ensembl	Ensembl	1,698 nt	Select Tool ZFIN BLAST
mRNA	fbxo16-205 (1) Ensembl	Ensembl	1,078 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations