ZFIN ID: ZDB-GENE-041010-180
Gene Name: exosome component 9
Gene Symbol: exosc9
Previous Names: im:6909054, zgc:101680 (1)
Location: Chr: 1   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6909054]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH exosc9 HUMAN ORTHOLOG No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process U1 snRNA 3'-end processing (more)
Cellular Component cytoplasmic exosome (RNase complex) (more)
Molecular Function AU-rich element binding (more)
GO Terms (all 14)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001247 (1)
  • InterPro:IPR015847 (1)
  • InterPro:IPR020568 (1)
  • InterPro:IPR027408 (1)
  • Pfam:PF01138 (1)
  • Pfam:PF03725 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA exosc9-001 (1) 1393
    exosc9-002 (1) 805
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM exosc9 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    exosc9 Contained in: [BAC] CH211-157H5 (1) (order this)
    exosc9 Encodes: [EST] IMAGE:6909054 (1) (order this)
    [cDNA] MGC:101680 (1) (order this), MGC:191888 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006077 (1) 1443 bp
    Genomic GenBank:BX323984 (1) 177080 bp
    Select Tool
    Polypeptide UniProtKB:Q5XJQ5 (1) 393 aa
    Sequence Clusters UniGene:132715 (1)
    Sequence Information (all 13)
    OTHER exosc9 GENE PAGES
  • Gene:450057 (1)
  • VEGA:OTTDARG00000021663 (1)
  • Ensembl(Zv9):ENSDARG00000006392 (1)
  • ORTHOLOGY No data available
    CITATIONS (11)