ZFIN ID: ZDB-GENE-040912-78
Gene Name: transglutaminase 2, C polypeptide A
Gene Symbol: tgm2a
Previous Names: TG2c (1), tgm2, zgc:101081
Location: Chr: 23   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 2 publications
Directly Submitted Expression Data: 3 figures (2 images) from Thisse et al., 2004 [IMAGE:7137767]
  4 figures (3 images) from Thisse et al., 2004 [IMAGE:7146244]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
  muscle, myotome, somite, unspecified (all 5) expand
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process peptide cross-linking (more)
Cellular Component cellular_component (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR013808 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • PROSITE:PS00547 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tgm2-001 (1) 2120
    ncRNA tgm2-002 (1) 976
    tgm2-003 (1) 788
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tgm2a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tgm2a Contained in: [BAC] DKEY-65J6 (1), DKEY-151K14 (1)
    tgm2a Encodes: [EST] IMAGE:7137767 (1) (order this), IMAGE:7146244 (1) (order this)
    [cDNA] MGC:101081 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004647 (1) 2101 bp
    Genomic GenBank:CR545469 (1) 145419 bp
    Select Tool
    Polypeptide UniProtKB:F1R1A8 (1) 679 aa
    Sequence Clusters UniGene:88666 (1)
    Sequence Information (all 12)
    OTHER tgm2a GENE PAGES
  • Gene:447909 (1)
  • VEGA:OTTDARG00000021949 (1)
  • Ensembl(Zv9):ENSDARG00000070157 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish tgm2a 23  
    Human TGM2 20 (20q12)
  • OMIM:190196
  • Gene:7052
  • Mouse Tgm2 2 ( 78.72 cM)
  • MGI:98731
  • Gene:21817
  • Orthology Details
    CITATIONS (14)