Gene

tmf1

ID

ZDB-GENE-040801-25

Name

TATA element modulatory factor 1

Symbol

tmf1 Nomenclature History

Previous Names

zgc:100899

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to localize to Golgi apparatus and endoplasmic reticulum. Orthologous to human TMF1 (TATA element modulatory factor 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7148757 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tmf1 Human Ortholog

No data available

Associated With tmf1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR022091	TATA element modulatory factor 1, TATA binding
Family	IPR022092	TATA element modulatory factor 1 DNA binding
Family	IPR052602	Growth and transcription regulation protein

Domain Details Per Protein

Protein	Length	Growth and transcription regulation protein	TATA element modulatory factor 1 DNA binding	TATA element modulatory factor 1, TATA binding
UniProtKB:F1REB9 InterPro	1135
UniProtKB:A0A8M9QLK8 InterPro	1134

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	tmf1-201 (1) Ensembl	Ensembl		4,782 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations