Gene
havcr1
- ID
- ZDB-GENE-040718-131
- Name
- hepatitis A virus cellular receptor 1
- Symbol
- havcr1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Description
- Involved in cytoskeletal rearrangement involved in phagocytosis, engulfment and engulfment of apoptotic cell. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in atopic dermatitis. Is expressed in macrophage. Orthologous to human HAVCR1 (hepatitis A virus cellular receptor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 9 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:92647 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Kuil et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Length | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain |
---|---|---|---|---|---|
UniProtKB:Q6DH50
|
264 | ||||
UniProtKB:A0A2R8QGQ2
|
324 | ||||
UniProtKB:A0A1C6ZYS3
|
295 | ||||
UniProtKB:A0A8M9PI76
|
294 | ||||
UniProtKB:A0A8M3B4U0
|
323 | ||||
UniProtKB:A0A8M3AMA9
|
323 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
havcr1-201
(1)
|
Havana | 1004 nt | |
mRNA |
havcr1-202
(1)
|
Havana | 917 nt | |
mRNA |
havcr1-203
(1)
|
Havana | 910 nt | |
mRNA |
havcr1-204
(1)
|
Havana | 840 nt | |
mRNA |
havcr1-206
(1)
|
Ensembl | 3037 nt | |
ncRNA |
havcr1-005
(1)
|
Havana | 790 nt |
Interactions and Pathways
No data available
Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
---|---|---|---|---|---|---|---|
Ab1-havcr | monoclonal | IgG2b | Rat |
|
Novus Biologicals, LLC
|
2 |
Plasmids
No data available