Gene

rab7b

ID

ZDB-GENE-180906-1

Name

RAB7b, member RAS oncogene family

Symbol

rab7b Nomenclature History

Previous Names

rab7b (1)
Rab7-like (1)
wu:fj84g10
zgc:91909 (1)

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to have GTP binding activity and GTPase activity. Is expressed in intestinal bulb; neural crest; and yolk syncytial layer.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:91909 (14 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rab7b Human Ortholog

No data available

Associated With rab7b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR005225	Small GTP-binding protein domain
Family	IPR001806	Small GTPase
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase

Domain Details Per Protein

Protein	Length	P-loop containing nucleoside triphosphate hydrolase	Small GTPase	Small GTP-binding protein domain
UniProtKB:Q6GQM5 InterPro	204

Transcripts

Genome Browsers

UCSC

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	zgc:91909-201 (1) Ensembl	Havana	1260 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000048848 (1) Ensembl	Havana	637 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations