Gene

vamp3

ID

ZDB-GENE-040625-45

Name

vesicle-associated membrane protein 3 (cellubrevin)

Symbol

vamp3 Nomenclature History

Previous Names

zgc:86726

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have SNAP receptor activity and syntaxin-1 binding activity. Predicted to be involved in SNARE complex assembly. Predicted to localize to SNARE complex and plasma membrane. Orthologous to human VAMP3 (vesicle associated membrane protein 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With vamp3 Human Ortholog

No data available

Associated With vamp3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR042855	v-SNARE, coiled-coil homology domain
Family	IPR001388	Synaptobrevin-like
Family	IPR016444	Synaptobrevin/Vesicle-associated membrane protein

Domain Details Per Protein

Protein	Length	Synaptobrevin-like	Synaptobrevin/Vesicle-associated membrane protein	v-SNARE, coiled-coil homology domain
UniProtKB:Q6IQK3 InterPro	102

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vamp3-201 (1) Ensembl	Ensembl	384 nt	Select Tool
mRNA	vamp3-202 (1) Ensembl	Ensembl	1,287 nt	Select Tool
mRNA	vamp3-203 (1) Ensembl	Ensembl	3,633 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations