ZFIN is now using GRCz12tu for Genomic Data
Gene
samm50
- ID
- ZDB-GENE-040426-806
- Name
- SAMM50 sorting and assembly machinery component
- Symbol
- samm50 Nomenclature History
- Previous Names
-
- zgc:55803
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within liver development. Predicted to be located in mitochondrial outer membrane. Predicted to be part of SAM complex. Human ortholog(s) of this gene implicated in metabolic dysfunction-associated steatotic liver disease. Orthologous to human SAMM50 (SAMM50 sorting and assembly machinery component).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55803 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Bacterial surface antigen (D15) | POTRA domain | Surface antigen D15-like |
|---|---|---|---|---|---|
| UniProtKB:Q803G5 | InterPro | 469 | |||
| UniProtKB:B2GSP6 | InterPro | 469 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
samm50-201
(1)
|
Ensembl | 1,833 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers