Gene

rnf13

ID
ZDB-GENE-040426-772
Name
ring finger protein 13
Symbol
rnf13 Nomenclature History
Previous Names
  • wu:fj82g10
  • zgc:55660 (1)
  • zgc:77194
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to have ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy. Orthologous to human RNF13 (ring finger protein 13).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rnf13 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
developmental and epileptic encephalopathy 73 Alliance Developmental and epileptic encephalopathy 73 618379
Associated With rnf13 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001841 Zinc finger, RING-type
Domain IPR003137 PA domain
Domain IPR044744 ZNRF4 /RNF13/RNF167, PA domain
Family IPR051826 E3 ubiquitin-protein ligase domain-containing protein
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR046450 PA domain superfamily
Domain Details Per Protein
Protein Length E3 ubiquitin-protein ligase domain-containing protein PA domain PA domain superfamily Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type ZNRF4 /RNF13/RNF167, PA domain
UniProtKB:Q803J9 377
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnf13-201 (1) Ensembl 4,631 nt
mRNA rnf13-202 (1) Ensembl 1,968 nt
ncRNA rnf13-002 (1) Ensembl 671 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations