Gene

asb2b

ID

ZDB-GENE-040426-20

Name

ankyrin repeat and SOCS box containing 2b

Symbol

asb2b Nomenclature History

Previous Names

zgc:77223

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Involved in cardiac myofibril assembly. Is expressed in adaxial cell; brain; cardiovascular system; musculature system; and somite. Orthologous to human ASB2 (ankyrin repeat and SOCS box containing 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:77223 (15 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 6 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With asb2b Human Ortholog

No data available

Associated With asb2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001496	SOCS box domain
Homologous_superfamily	IPR036036	SOCS box-like domain superfamily
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat-containing domain superfamily	SOCS box domain	SOCS box-like domain superfamily
UniProtKB:A0A8M9P8U1 InterPro	512
UniProtKB:Q6NWY5 InterPro	563

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	asb2b-201 (1) Ensembl	Havana	819 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb2b-202 (1) Ensembl	Havana	470 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb2b-203 (1) Ensembl	Havana	2507 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb2b-204 (1) Ensembl	Havana	2475 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	asb2b-005 (1) Ensembl	Havana	284 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations