Gene

sar1b

ID
ZDB-GENE-040426-1958
Name
secretion associated, Ras related GTPase 1B
Symbol
sar1b Nomenclature History
Previous Names
  • sara2
  • zgc:73204
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to have GTPase activity. Involved in several processes, including embryonic viscerocranium morphogenesis; intestinal cholesterol absorption; and organ growth. Predicted to localize to COPII vesicle coat and endoplasmic reticulum exit site. Used to study chylomicron retention disease. Human ortholog(s) of this gene implicated in chylomicron retention disease. Is expressed in blastomere; digestive system; nervous system; pharyngeal arch; and primary germ layer. Orthologous to human SAR1B (secretion associated Ras related GTPase 1B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Levic et al., 2015
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from Levic et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sar1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
chylomicron retention disease Alliance Chylomicron retention disease 246700
Associated With sar1b Via Experimental Models
Human Disease Fish Conditions Citations
chylomicron retention disease AB + MO1-sar1b control Levic et al., 2015
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005225 Small GTP-binding domain
Family IPR006687 Small GTPase superfamily, SAR1-type
Family IPR006689 Small GTPase superfamily, ARF/SAR type
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length P-loop containing nucleoside triphosphate hydrolase Small GTPase superfamily, ARF/SAR type Small GTPase superfamily, SAR1-type Small GTP-binding domain
UniProtKB:Q6PBX2 198
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sar1b-201 (1) Ensembl 2,024 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations