Gene

tial1

ID

ZDB-GENE-040426-1547

Name

TIA1 cytotoxic granule-associated RNA binding protein-like 1

Symbol

tial1 Nomenclature History

Previous Names

zgc:66130 (1)

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to have DNA binding activity and RNA binding activity. Orthologous to human TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:66130 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tial1 Human Ortholog

No data available

Associated With tial1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR003954	RNA recognition motif domain, eukaryote
Domain	IPR034492	TIAR, RNA recognition motif 1
Domain	IPR034494	TIAR, RNA recognition motif 2
Domain	IPR034496	TIAR, RNA recognition motif 3
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	RNA recognition motif domain	RNA recognition motif domain, eukaryote	TIAR, RNA recognition motif 1	TIAR, RNA recognition motif 2	TIAR, RNA recognition motif 3
UniProtKB:A0A8M2B2U9 InterPro	380
UniProtKB:E9QJJ0 InterPro	389
UniProtKB:A0A8M3B810 InterPro	248
UniProtKB:A0A8M2B338 InterPro	399
UniProtKB:A0A8M2B3J6 InterPro	388
UniProtKB:A0A8M3AZ31 InterPro	398
UniProtKB:Q7SXQ1 InterPro	370
UniProtKB:A0A8M9QJL2 InterPro	214
UniProtKB:A0A8M2B2Y3 InterPro	258

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tial1-201 (1) Ensembl	Ensembl	2,462 nt	Select Tool
mRNA	tial1-202 (1) Ensembl	Ensembl	409 nt	Select Tool
mRNA	tial1-204 (1) Ensembl	Ensembl	1,208 nt	Select Tool
ncRNA	tial1-003 (1) Ensembl	Ensembl	807 nt	Select Tool
ncRNA	tial1-004 (1) Ensembl	Ensembl	796 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations