Gene

smtnl

ID
ZDB-GENE-040212-1
Name
smoothelin, like
Symbol
smtnl Nomenclature History
Previous Names
  • wu:fc73c08
  • zgc:101796
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Exhibits actin binding activity. Involved in chordate embryonic development. Predicted to colocalize with intermediate filament. Is expressed in several structures, including cardiovascular system; epidermis; intestinal bulb primordium; nervous system; and periderm. Orthologous to human SMTNL2 (smoothelin like 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Hachimi et al., 2020
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smtnl Human Ortholog
No data available
Associated With smtnl Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001715 Calponin homology domain
Family IPR050540 F-actin Monooxygenase Mical
Homologous_superfamily IPR036872 CH domain superfamily
Domain Details Per Protein
Protein Length Calponin homology domain CH domain superfamily F-actin Monooxygenase Mical
UniProtKB:Q76C07 493
UniProtKB:Q5BL23 493
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smtnl-201 (1) Ensembl 2,159 nt
mRNA smtnl-202 (1) Ensembl 1,519 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations