ZFIN ID: ZDB-GENE-040109-7
Gene Name: histone deacetylase 9b
Gene Symbol: hdac9b
Previous Name: hdac9
Location: Chr: 16   Details
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la019605Tg, la019607Tg, la019608Tg
Knockdown reagents: MO1-hdac9b (1), MO2-hdac9b (1)
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chromatin modification (more)
Cellular Component nucleus (more)
Molecular Function NAD-dependent histone deacetylase activity (H3-K14 specific) (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286 (1)
  • InterPro:IPR024643 (1)
  • Pfam:PF12203 (1)
  • EC:3.5.1.98 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac9b-001 (1) 2272
    ncRNA hdac9b-002 (1) 3778
    mRNA hdac9b-003 (1) 825
    ncRNA hdac9b-004 (1) 559
    hdac9b-005 (1) 287
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hdac9b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    hdac9b Contained in: [BAC] CH73-108F20 (1) (order this), DKEY-242C17 (1)
    hdac9b Encodes: [cDNA] MGC:73392 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200816 (1) 2181 bp
    Genomic GenBank:BX511151 (1) 157538 bp
    Select Tool
    Polypeptide UniProtKB:F1QUC6 (1) 643 aa
    Sequence Clusters UniGene:25756 (1)
    Sequence Information (all 18)
    OTHER hdac9b GENE PAGES
  • Gene:393789 (1)
  • VEGA:OTTDARG00000033007 (1)
  • Ensembl(Zv9):ENSDARG00000056642 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish hdac9b 16  
    Human HDAC9 7 (7p21.1)
  • OMIM:606543
  • Gene:9734
  • Orthology Details
    CITATIONS (24)