Gene

snx9b

ID
ZDB-GENE-031118-50
Name
sorting nexin 9b
Symbol
snx9b Nomenclature History
Previous Names
  • snx9l
  • si:dkeyp-70e6.2
  • wu:fj22c06 (1)
  • wu:fj94b09 (1)
  • wu:fk76d01
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have phosphatidylinositol binding activity. Predicted to be involved in endocytosis; intracellular protein transport; and mitotic cytokinesis. Predicted to localize to cytoplasmic vesicle membrane. Orthologous to human SNX9 (sorting nexin 9).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With snx9b Human Ortholog
No data available
Associated With snx9b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001452 SH3 domain
Domain IPR001683 Phox homology
Domain IPR019497 Sorting nexin protein, WASP-binding domain
Domain IPR035558 SNX9, SH3 domain
Domain IPR037425 Sorting nexin-9, BAR domain
Domain IPR037426 Sorting nexin-9, PX domain
Family IPR014536 Sorting nexin 9 family
Homologous_superfamily IPR027267 AH/BAR domain superfamily
Homologous_superfamily IPR036028 SH3-like domain superfamily
Homologous_superfamily IPR036871 PX domain superfamily
Domain Details Per Protein
Protein Length AH/BAR domain superfamily Phox homology PX domain superfamily SH3 domain SH3-like domain superfamily SNX9, SH3 domain Sorting nexin-9, BAR domain Sorting nexin 9 family Sorting nexin-9, PX domain Sorting nexin protein, WASP-binding domain
UniProtKB:A0A8M9PBT0 620
UniProtKB:Q5SPP2 581
UniProtKB:A0A8M2BI00 608
UniProtKB:A0A8M9PHD2 593
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript snx9b-201 (1) Ensembl 2,965 nt
mRNA snx9b-202 (1) Ensembl 2,799 nt
ncRNA snx9b-003 (1) Ensembl 494 nt
ncRNA snx9b-004 (1) Ensembl 389 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations