Gene

casp2

ID
ZDB-GENE-030825-3
Name
caspase 2, apoptosis-related cysteine peptidase
Symbol
casp2 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have cysteine-type endopeptidase activity involved in apoptotic process. Involved in intrinsic apoptotic signaling pathway in response to DNA damage; positive regulation of apoptotic process; and regulation of cysteine-type endopeptidase activity involved in apoptotic process. Predicted to localize to cytoplasm. Is expressed in digestive system; nervous system; and pharyngeal arch. Orthologous to human CASP2 (caspase 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from Spead et al., 2018
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With casp2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Intellectual developmental disorder, autosomal recessive 80, with variant lissencephaly 620653
Associated With casp2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Active_site IPR016129 Peptidase family C14A, His active site
Active_site IPR033139 Peptidase family C14A, cysteine active site
Domain IPR001309 Peptidase C14, p20 domain
Domain IPR001315 CARD domain
Domain IPR002138 Peptidase C14, caspase non-catalytic subunit p10
Domain IPR011600 Peptidase C14, caspase domain
Domain IPR015917 Peptidase C14A, caspase catalytic domain
Domain IPR035702 Caspase-2, CARD domain
Homologous_superfamily IPR011029 Death-like domain superfamily
Homologous_superfamily IPR029030 Caspase-like domain superfamily
Domain Details Per Protein
Protein Length CARD domain Caspase-2, CARD domain Caspase-like domain superfamily Death-like domain superfamily Peptidase C14A, caspase catalytic domain Peptidase C14, caspase domain Peptidase C14, caspase non-catalytic subunit p10 Peptidase C14, p20 domain Peptidase family C14A, cysteine active site Peptidase family C14A, His active site
UniProtKB:A0A288CG41 437
UniProtKB:Q0PKX3 435
UniProtKB:A0A8M9P7T2 313
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA casp2-201 (1) Ensembl 783 nt
mRNA casp2-202 (1) Ensembl 4,503 nt
mRNA casp2-203 (1) Ensembl 1,800 nt
mRNA casp2-204 (1) Ensembl 2,644 nt
mRNA casp2-205 (1) Ensembl 1,308 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations