Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-9634
Gene Name: coagulation factor XIII, A1 polypeptide b
Gene Symbol: f13a1b
Previous Names: f13a1, fo83d04, FX111a-87 (1), wu:fo83d04, zgc:153334
Location: Chr: 7   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2011
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
  pectoral fin, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Factor XIIIA deficiency 613225
{Myocardial infarction, protection against} 608446
{Venous thrombosis, protection against} 188050
GENE ONTOLOGY
Ontology GO Term
Biological Process peptide cross-linking (more)
Cellular Component cellular_component (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA f13a1b-001 (1) 3162
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM f13a1b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    f13a1b Contained in: [BAC] DKEY-185M8 (1), DKEYP-32G11 (1)
    f13a1b Encodes: [EST] fo83d04
    [cDNA] MGC:153334 (1) (order this), MGC:192746 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077154 (1) 2589 bp
    Genomic GenBank:BX004828 (1) 161870 bp
    Select Tool
    Polypeptide UniProtKB:F1R1R7 (1) 742 aa
    Sequence Clusters UniGene:16206 (1)
    Sequence Information (all 17)
    OTHER f13a1b GENE PAGES
  • Gene:561287 (1)
  • VEGA:OTTDARG00000035389 (1)
  • Ensembl(Zv9):ENSDARG00000036893 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA
    Zebrafish f13a1b 7  
    Human F13A1 6 (6p25.3-p24.3)
  • OMIM:134570
  • Gene:2162
  • Orthology Details
    CITATIONS (15)