Gene

lnx1

ID
ZDB-GENE-030131-9439
Name
ligand of numb-protein X 1
Symbol
lnx1 Nomenclature History
Previous Names
  • lnx
  • fj78f06
  • si:dkey-12h2.1
  • wu:fj78f06
  • zgc:152906
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Orthologous to human LNX1 (ligand of numb-protein X 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lnx1 Human Ortholog
No data available
Associated With lnx1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR001478 PDZ domain
Domain IPR001841 Zinc finger, RING-type
Family IPR051342 PDZ domain-containing scaffold protein
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR036034 PDZ superfamily
Domain Details Per Protein
Protein Length PDZ domain PDZ domain-containing scaffold protein PDZ superfamily Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:A0A8M3AW57 655
UniProtKB:A0A8M2B7D3 657
UniProtKB:Q08CM8 754
UniProtKB:A0A8M2B7C0 767
UniProtKB:A0A8M2B7C4 767
UniProtKB:A0A8M3AT53 653
UniProtKB:A0A8M2B7L4 769
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lnx1-201 (1) Ensembl 492 nt
mRNA lnx1-202 (1) Ensembl 3,317 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations