Gene

si:ch1073-440b2.1

ID

ZDB-GENE-030131-8303

Name

si:ch1073-440b2.1

Symbol

si:ch1073-440b2.1 Nomenclature History

Previous Names

fb08c06
wu:fb08c06 (1)

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity. Orthologous to several human genes including LONRF2 (LON peptidase N-terminal domain and ring finger 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:ch1073-440b2.1 Human Ortholog

No data available

Associated With si:ch1073-440b2.1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR003111	Lon protease, N-terminal domain
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR027370	Zinc finger, RING-type, eukaryotic
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR015947	PUA-like superfamily
Homologous_superfamily	IPR046336	Lon protease, N-terminal domain superfamily

Domain Details Per Protein

Protein	Length	Immunoglobulin-like domain	Lon protease, N-terminal domain	Lon protease, N-terminal domain superfamily	PUA-like superfamily	Tetratricopeptide-like helical domain superfamily	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type	Zinc finger, RING-type, conserved site	Zinc finger, RING-type, eukaryotic
UniProtKB:A0A8M1Q1W3 InterPro	749
UniProtKB:E7EYP4 InterPro	488
UniProtKB:A0A8M9Q9S3 InterPro	749

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:ch1073-440b2.1-201 (1) Ensembl	Ensembl		2,044 nt	Select Tool
mRNA	si:ch1073-440b2.1-202 (1) Ensembl	Ensembl		1,308 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations