Gene

trim9

ID

ZDB-GENE-030131-8043

Name

tripartite motif containing 9

Symbol

trim9 Nomenclature History

Previous Names

fj48c11
wu:fj48c11
zgc:77357

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to enable zinc ion binding activity. Predicted to be located in cytoskeleton. Predicted to be active in cytoplasm. Is expressed in head. Orthologous to human TRIM9 (tripartite motif containing 9).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trim9 Human Ortholog

No data available

Associated With trim9 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR000315	B-box-type zinc finger
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR001870	B30.2/SPRY domain
Domain	IPR003649	B-box, C-terminal
Domain	IPR003877	SPRY domain
Domain	IPR003961	Fibronectin type III
Domain	IPR017903	COS domain
Domain	IPR049582	Tripartite motif-containing protein 9, B-box-type 1 zinc finger
Family	IPR050617	E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR043136	B30.2/SPRY domain superfamily