Gene
phf20l1
- ID
- ZDB-GENE-030131-5837
- Name
- PHD finger protein 20 like 1
- Symbol
- phf20l1 Nomenclature History
- Previous Names
-
- fi20g04
- si:dkey-97i18.2
- wu:fi20g04 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to have metal ion binding activity and nucleic acid binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in cloaca and proctodeum. Orthologous to human PHF20L1 (PHD finger protein 20 like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7162257 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
Domain | IPR001965 | Zinc finger, PHD-type |
Domain | IPR002999 | Tudor domain |
Domain | IPR013087 | Zinc finger C2H2-type |
Domain | IPR014002 | Agenet domain, plant type |
Domain | IPR040477 | Lysine-specific demethylase 4-like, Tudor domain |
Domain | IPR047405 | PHD finger protein 20-like protein 1, Tudor domain |
Family | IPR043449 | PHD finger protein 20-like |
Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Domain Details Per Protein
Protein | Length | Agenet domain, plant type | Lysine-specific demethylase 4-like, Tudor domain | PHD finger protein 20-like | PHD finger protein 20-like protein 1, Tudor domain | Tudor domain | Zinc finger C2H2-type | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type |
---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9PDN4
|
1116 | ||||||||||
UniProtKB:A0A8M9PDN8
|
1082 | ||||||||||
UniProtKB:A0A8M9NZQ6
|
1114 | ||||||||||
UniProtKB:A0A8M9PK38
|
1115 | ||||||||||
UniProtKB:A0A8M3B1U6
|
1115 | ||||||||||
UniProtKB:A0A8M9P8D3
|
1084 | ||||||||||
UniProtKB:A0A8M9PN32
|
1081 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
phf20l1-201
(1)
|
Havana | 4381 nt | |
mRNA |
phf20l1-202
(1)
|
Havana | 838 nt | |
mRNA |
phf20l1-203
(1)
|
Ensembl | 2967 nt |
Interactions and Pathways
No data available
Plasmids
No data available