Gene

hltf

ID
ZDB-GENE-030131-3306
Name
helicase-like transcription factor
Symbol
hltf Nomenclature History
Previous Names
  • smarca3 (1)
  • wu:fc33f07
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have several functions, including ATP binding activity; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; and zinc ion binding activity. Orthologous to human HLTF (helicase like transcription factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Li et al., 2021
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hltf Human Ortholog
No data available
Associated With hltf Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000330 SNF2, N-terminal
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR001841 Zinc finger, RING-type
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014905 HIRAN domain
Domain IPR018957 Zinc finger, C3HC4 RING-type
Domain IPR049730 SNF2/RAD5-like, C-terminal helicase domain
Family IPR050628 SNF2/RAD54 Helicase and Transcription Factor
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR038718 SNF2-like, N-terminal domain superfamily
Domain Details Per Protein
Protein Length Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain HIRAN domain P-loop containing nucleoside triphosphate hydrolase SNF2-like, N-terminal domain superfamily SNF2, N-terminal SNF2/RAD54 Helicase and Transcription Factor SNF2/RAD5-like, C-terminal helicase domain Zinc finger, C3HC4 RING-type Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:A0A8M9P9A8 907
UniProtKB:A0A8M3APR6 491
UniProtKB:A0A2R8Q5J1 908
UniProtKB:A0A8M3AXA6 941
UniProtKB:A0A8M2BAK6 942
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hltf-201 (1) Ensembl 3,062 nt
mRNA hltf-205 (1) Ensembl 3,721 nt
ncRNA hltf-002 (1) Ensembl 719 nt
ncRNA hltf-003 (1) Ensembl 638 nt
ncRNA hltf-004 (1) Ensembl 741 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations