Gene

ogfod1

ID
ZDB-GENE-030131-3294
Name
2-oxoglutarate and iron-dependent oxygenase domain containing 1
Symbol
ogfod1 Nomenclature History
Previous Names
  • wu:fc33b08
  • zgc:66379 (1)
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have peptidyl-proline dioxygenase activity. Predicted to be involved in peptidyl-proline hydroxylation and regulation of translational termination. Predicted to localize to cytoplasm. Orthologous to human OGFOD1 (2-oxoglutarate and iron dependent oxygenase domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ogfod1 Human Ortholog
No data available
Associated With ogfod1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006620 Prolyl 4-hydroxylase, alpha subunit
Domain IPR019601 Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain
Domain IPR039558 Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain
Family IPR051842 Ribosomal subunit uS12 prolyl hydroxylase
Domain Details Per Protein
Protein Length Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain Prolyl 4-hydroxylase, alpha subunit Ribosomal subunit uS12 prolyl hydroxylase
UniProtKB:F1QTC6 521
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ogfod1-201 (1) Ensembl 2,523 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations