Gene

tmem39a

ID

ZDB-GENE-030131-1928

Name

transmembrane protein 39A

Symbol

tmem39a Nomenclature History

Previous Names

fb92e03
wu:fb92e03
zgc:65781
zgc:77444 (1)

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Orthologous to human TMEM39A (transmembrane protein 39A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:77444 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tmem39a Human Ortholog

No data available

Associated With tmem39a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR019397	Uncharacterised protein family TMEM39

Domain Details Per Protein

Protein	Length	Uncharacterised protein family TMEM39
UniProtKB:Q6PH58 InterPro	481

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tmem39a-203 (1) Ensembl	Havana	411 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tmem39a-201 (1) Ensembl	Havana	521 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tmem39a-202 (1) Ensembl	Havana	905 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tmem39a-204 (1) Ensembl	Havana	2207 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tmem39a-205 (1) Ensembl	Havana	196 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tmem39a-208 (1) Ensembl	Havana	1472 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	tmem39a-004 (1) Ensembl	Havana	493 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	tmem39a-005 (1) Ensembl	Havana	807 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations