Gene

nup50

ID
ZDB-GENE-030131-1689
Name
nucleoporin 50
Symbol
nup50 Nomenclature History
Previous Names
  • wu:fa56e03
  • wu:fb78a08
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Predicted to be involved in protein import into nucleus. Predicted to localize to nuclear pore. Orthologous to human NUP50 (nucleoporin 50).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Megat et al., 2023
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nup50 Human Ortholog
No data available
Associated With nup50 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000156 Ran binding domain
Domain IPR015007 Nuclear pore complex, NUP2/50/61
Family IPR045255 Ran binding protein RanBP1-like
Homologous_superfamily IPR011993 PH-like domain superfamily
Domain Details Per Protein
Protein Length Nuclear pore complex, NUP2/50/61 PH-like domain superfamily Ran binding domain Ran binding protein RanBP1-like
UniProtKB:Q6P0F8 421
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nup50-201 (1) Ensembl 2,357 nt
mRNA nup50-203 (1) Ensembl 3,644 nt
mRNA nup50-204 (1) Ensembl 193 nt
mRNA nup50-205 (1) Ensembl 2,092 nt
ncRNA nup50-002 (1) Ensembl 1,744 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations