Gene
rps27a
- ID
- ZDB-GENE-030131-10018
- Name
- ribosomal protein S27a
- Symbol
- rps27a Nomenclature History
- Previous Names
-
- hm:zeh0386
- ik:tdsubc_1f2
- tdsubc_1f2
- xx:tdsubc_1f2
- zgc:66168
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to enable protein tag and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Predicted to be active in cytoplasm and nucleus. Orthologous to human RPS27A (ribosomal protein S27a).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:66168 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019954 | Ubiquitin conserved site |
| Domain | IPR000626 | Ubiquitin-like domain |
| Domain | IPR002906 | Small ribosomal subunit protein eS31 |
| Domain | IPR019956 | Ubiquitin domain |
| Family | IPR050158 | Ubiquitin and ubiquitin-like |
| Homologous_superfamily | IPR011332 | Zinc-binding ribosomal protein |
| Homologous_superfamily | IPR029071 | Ubiquitin-like domain superfamily |
| Homologous_superfamily | IPR038582 | Small ribosomal subunit protein eS31 eukaryotic-type superfamily |
Domain Details Per Protein
| Protein | Length | Small ribosomal subunit protein eS31 | Small ribosomal subunit protein eS31 eukaryotic-type superfamily | Ubiquitin and ubiquitin-like | Ubiquitin conserved site | Ubiquitin domain | Ubiquitin-like domain | Ubiquitin-like domain superfamily | Zinc-binding ribosomal protein |
|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q7SXA3
|
156 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rps27a-201
(1)
|
Ensembl | 668 nt | ||
| mRNA |
rps27a-204
(1)
|
Ensembl | 721 nt | ||
| ncRNA |
rps27a-003
(1)
|
Ensembl | 684 nt | ||
| ncRNA |
rps27a-004
(1)
|
Ensembl | 820 nt | ||
| ncRNA |
rps27a-005
(1)
|
Ensembl | 601 nt |
Interactions and Pathways
No data available
Plasmids
No data available