Gene

gtf2ird1

ID

ZDB-GENE-010328-18

Name

GTF2I repeat domain containing 1

Symbol

gtf2ird1 Nomenclature History

Previous Names

si:dkey-32e10.2
si:dkey-32e10.4-001

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Orthologous to human GTF2IRD1 (GTF2I repeat domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gtf2ird1 Human Ortholog

No data available

Associated With gtf2ird1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Homologous_superfamily	IPR036647	GTF2I-like repeat superfamily
Repeat	IPR004212	GTF2I-like repeat

Domain Details Per Protein

Protein	Length	GTF2I-like repeat	GTF2I-like repeat superfamily
UniProtKB:A0A8M9PLI6 InterPro	974
UniProtKB:A0A8M9QEX5 InterPro	973
UniProtKB:A0A8M1RNF2 InterPro	973

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	gtf2ird1-201 (1) Ensembl	Ensembl	5,229 nt	Select Tool
mRNA	gtf2ird1-203 (1) Ensembl	Ensembl	351 nt	Select Tool ZFIN BLAST
ncRNA	gtf2ird1-002 (1) Ensembl	Ensembl	535 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations