Gene

pbx1a

ID
ZDB-GENE-000405-1
Name
pre-B-cell leukemia homeobox 1a
Symbol
pbx1a Nomenclature History
Previous Names
  • pbx1b (1)
  • fi29e01
  • wu:fi29e01 (1)
  • zgc:55265 (1)
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in hemopoiesis; swim bladder morphogenesis; and vasculature development. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in B-lymphoblastic leukemia/lymphoma. Is expressed in several structures, including central nervous system; head; pleuroperitoneal region; presumptive swim bladder; and swim bladder bud. Orthologous to human PBX1 (PBX homeobox 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
15 figures from 6 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pbx1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay Alliance Congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay 617641
Associated With pbx1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR005542 PBX, PBC domain
Domain IPR008422 KN homeodomain
Family IPR050224 Three Amino acid Loop Extension (TALE) homeobox
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeodomain KN homeodomain PBX, PBC domain Three Amino acid Loop Extension (TALE) homeobox
UniProtKB:Q9I9B7 428
UniProtKB:A0A8M6Z2J2 425
UniProtKB:Q9I9B6 346
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pbx1a-201 (1) Ensembl 1,835 nt
mRNA pbx1a-202 (1) Ensembl 6,743 nt
ncRNA pbx1a-002 (1) Ensembl 1,654 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations