ZFIN Sequences for Gene: spon1a

ZFIN ID: ZDB-GENE-000427-9

ZFIN ID: ZDB-GENE-000427-9

SEQUENCE INFORMATION

Gene Name:	spondin 1a
Gene Symbol:	spon1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_131515 (1)	3146 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AB006086 (1)	3146 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC162586 (1)	2896 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:KM655720 (1)	2424 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01012885 (1)	2157 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX649600	228633 nt	Blast at MegaBLAST
	GenBank:AL935117	213808 nt	Blast at MegaBLAST
	GenBank:BX649638 (1)	185544 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX571957 (1)	179945 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR388185 (1)	178361 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX005470	172552 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR457484	169672 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX005239 (1)	168745 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX548023	151449 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX914206 (2)	139321 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR769777 (1)	124874 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX897716	123512 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX571798	108129 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX908394	102817 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX571881	100776 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX890541	94449 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX908800	90728 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX927408	90451 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR391939 (2)	83565 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR388161 (2)	80508 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR936382	78500 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX908791	66694 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX927145 (1)	59144 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT573180 (2)	50193 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX908779 (2)	39064 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX927169 (1)	29649 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX897663 (2)	21597 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:BX908746 (1)	7515 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:JBMGRA010000018 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:O42113 (1)	808 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_571590 (1)	808 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AJG06066 (1)	808 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:BAA22810 (1)	808 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK04115 (1)	808 aa	Select Tool ZFIN BLAST NCBI BLAST

spon1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-64M24 (1)	Genomic	GenBank:BX649638	185544	Select Tool MegaBLAST Ensembl
[BAC] CH211-122K23 (1)	Genomic	GenBank:BX005470	172552	Select Tool MegaBLAST Ensembl
[BAC] CH211-132F3 (1)	Genomic	GenBank:CR457484	169672	Select Tool MegaBLAST Ensembl
[BAC] CH211-140O4 (1)	Genomic	GenBank:BX908779	39064	Select Tool MegaBLAST Ensembl
[BAC] CH211-144F7 (1)	Genomic	GenBank:BX005239	168745	Select Tool MegaBLAST Ensembl
[BAC] CH211-174J14 (1)	Genomic	GenBank:BX914206	139321	Select Tool MegaBLAST Ensembl
[BAC] CH211-181P22 (1)	Genomic	GenBank:BX897663	21597	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[BAC] CH211-197G22 (1)	Genomic	GenBank:AL935117	213808	Blast at MegaBLAST
[BAC] CH211-220F20 (1)	Genomic	GenBank:CR936382	78500	Select Tool MegaBLAST Ensembl
[BAC] CH211-222M18 (1)	Genomic	GenBank:BX649600	228633	Blast at MegaBLAST
[BAC] CH211-256G21 (1)	Genomic	GenBank:CR388185	178361	Select Tool MegaBLAST Ensembl
[BAC] CH211-269G3 (1)	Genomic	GenBank:CR391939	83565	Select Tool MegaBLAST Ensembl
[BAC] CH211-288B17 (1)	Genomic	GenBank:CR388161	80508	Select Tool MegaBLAST Ensembl
[BAC] DKEY-11E14 (1)	Genomic	GenBank:CT573180	50193	Select Tool MegaBLAST Ensembl
[BAC] DKEY-30I4 (1)	Genomic	GenBank:BX927408	90451	Select Tool MegaBLAST Ensembl
[BAC] DKEY-80D5 (1)	Genomic	GenBank:BX927145	59144	Select Tool MegaBLAST Ensembl
[BAC] DKEY-106H23 (1)	Genomic	GenBank:BX908394	102817	Select Tool MegaBLAST Ensembl
[BAC] DKEY-115P24 (1)	Genomic	GenBank:BX927169	29649	Select Tool MegaBLAST Ensembl
[BAC] DKEY-177F24 (1)	Genomic	GenBank:BX897716	123512	Select Tool MegaBLAST Ensembl
[BAC] DKEY-189D19 (1)	Genomic	GenBank:CR769777	124874	Select Tool MegaBLAST Ensembl
[BAC] DKEY-190G1 (1)	Genomic	GenBank:BX908746	7515	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[BAC] DKEY-199I24 (1)	Genomic	GenBank:BX571798	108129	Select Tool MegaBLAST Ensembl
[BAC] DKEY-220E7 (1)	Genomic	GenBank:BX908800	90728	Select Tool MegaBLAST Ensembl
[BAC] DKEY-251M4 (1)	Genomic	GenBank:BX571881	100776	Select Tool MegaBLAST Ensembl
[BAC] DKEY-261H15 (1)	Genomic	GenBank:BX908791	66694	Select Tool MegaBLAST Ensembl
[BAC] DKEY-265O13 (1)	Genomic	GenBank:BX548023	151449	Select Tool MegaBLAST Ensembl
[BAC] DKEYP-77B5 (1)	Genomic	GenBank:BX890541	94449	Select Tool MegaBLAST Ensembl
[BAC] DKEYP-117B4 (1)	Genomic	GenBank:BX571957	179945	Select Tool MegaBLAST Ensembl