ZFIN Sequences for Gene: CH1073-403A9

ZFIN ID: ZDB-FOSMID-090114-110

ZFIN ID: ZDB-FOSMID-090114-110

SEQUENCE INFORMATION

Fosmid Name:	CH1073-403A9

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001122849 (1)	603 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005158934 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_009293306 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_017351872 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021467492 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021467493 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:BC134242 (1)	1592 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01000473 (1)	857 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB939010 (1)	603 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:FJ392614 (1)	265 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01024360 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:GFIL01024362 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:CU459072 (1)	117048 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU638738	31127 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU694315 (1)	27772 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M9P0S1 (1)	358 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:E7F1F7 (1)	352 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:E7F1F6 (1)	199 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9P9P3 (1)	143 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6Z2I2 (1)	128 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A3KPA7 (1)	99 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001116321 (1)	99 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005158991 (1)	199 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009291581 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017207361 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021323167 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021323168 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI34243 (1)	99 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:ACJ64068 (1)	88 aa	Select Tool ZFIN BLAST NCBI BLAST

CH1073-403A9 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] acyp1 (11)	RNA	RefSeq:NM_001122849	603	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC134242	1592	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01000473	857	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EB939010	603	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:FJ392614	265	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU459072	117048	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU638738	31127	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A3KPA7	99	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001116321	99	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI34243	99	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:ACJ64068	88	Select Tool ZFIN BLAST NCBI BLAST
[GENE] fosaa (12)	RNA	RefSeq:XM_021467492		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_009293306		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01024360		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU638738	31127	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0A8M9P0S1	358	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:E7F1F7	352	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_021323167		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_009291581		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] jdp2a (8)	RNA	RefSeq:XM_021467493		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_017351872		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005158934		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01024362		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU638738	31127	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU694315	27772	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:E7F1F6	199	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M9P9P3	143	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M6Z2I2	128	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_021323168		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_017207361		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005158991	199	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast