ZFIN Sequences for Gene: CH73-334L12

ZFIN ID: ZDB-BAC-071002-178

ZFIN ID: ZDB-BAC-071002-178

SEQUENCE INFORMATION

BAC Name:	CH73-334L12

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001008619 (1)	3504 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001195197 (1)	1794 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_178306 (1)	1709 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005174262 (1)	3312 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005174261 (1)	3266 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_688940 (1)	2581 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017354058 (1)	1935 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021473827 (1)	1885 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01013765 (1)	4724 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01001840 (1)	3906 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC086742 (1)	3504 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01041739 (1)	2212 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC124691 (1)	1920 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01034862 (1)	1910 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BK007873 (1)	1794 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AF548566 (1)	1727 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC059550 (1)	1710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI979059 (1)	637 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX001042 (1)	168195 nt	Select Tool MegaBLAST Ensembl
	GenBank:FQ311933 (2)	141931 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU394253	98637 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU929268 (2)	30375 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU928085 (2)	11707 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:Q5PRA2 (1)	920 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1Q4T7 (1)	598 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:E0R7P7 (1)	597 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BLI0 (1)	594 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q6PBX4 (1)	483 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6YYD4 (1)	477 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PED2 (1)	397 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1QKS2 (1)	397 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001182126 (1)	597 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001008619 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_840091 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005174318 (1)	598 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005174319 (1)	594 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017209547 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021329502 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_694032 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH86742 (1)	925 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:Q5PRA2 (1)	920 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:DAA33893 (1)	597 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH59550 (1)	483 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAN59951 (1)	471 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI24692 (1)	423 aa	Select Tool ZFIN BLAST NCBI BLAST

CH73-334L12 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] dhtkd1 (16)	RNA	RefSeq:NM_001008619	3504	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01001840	3906	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC086742	3504	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU394253	98637	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU929268	30375	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU928085	11707	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	Polypeptide	UniProtKB:Q5PRA2	920	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001008619		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH86742	925	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:Q5PRA2	920	Select Tool ZFIN BLAST NCBI BLAST
[GENE] kcnc1b (9)	RNA	RefSeq:XM_005174262	3312	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005174261	3266	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001195197	1794	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01013765	4724	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BK007873	1794	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX001042	168195	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU394253	98637	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:F1Q4T7	598	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:E0R7P7	597	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M2BLI0	594	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005174318	598	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001182126	597	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005174319	594	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:DAA33893	597	Select Tool ZFIN BLAST NCBI BLAST
[GENE] sergef (8)	RNA	RefSeq:XM_688940	2581	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_021473827	1885	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC124691	1920	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01034862	1910	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX001042	168195	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU394253	98637	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:F1QKS2	397	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M9PED2	397	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_694032		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_021329502		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI24692	423	Select Tool ZFIN BLAST NCBI BLAST
[GENE] tph1a (70)	RNA	RefSeq:XM_017354058	1935	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_178306	1709	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01041739	2212	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AF548566	1727	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC059550	1710	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BI979059	637	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX001042	168195	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:FQ311933	141931	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU394253	98637	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q6PBX4	483	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M6YYD4	477	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_017209547		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_840091		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH59550	483	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAN59951	471	Select Tool ZFIN BLAST NCBI BLAST