ZFIN Sequences for Gene: CH211-147G22

ZFIN ID: ZDB-BAC-050218-2321

ZFIN ID: ZDB-BAC-050218-2321

SEQUENCE INFORMATION

BAC Name:	CH211-147G22

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001089325 (1)	3304 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001327913 (1)	1951 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001327909 (1)	1604 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001327918 (1)	1164 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073941646 (1)	2708 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073941645 (1)	1172 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01000306 (1)	3909 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC115260 (1)	3304 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC154244 (1)	3294 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01024848 (1)	1312 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01002616 (1)	1086 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK017890 (1)	931 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH466711 (1)	827 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH440805 (1)	765 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01019914 (1)	691 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01042990 (1)	685 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR339041	161478 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR339041 (2)	149533 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR854891 (1)	135337 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX572619 (1)	64564 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000025 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A4FUN4 (1)	965 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58IU49 (1)	371 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:X1WF83 (1)	357 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58IU37 (1)	351 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M1P987 (1)	348 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1RAH3 (1)	332 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001082794 (1)	965 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001314847 (1)	357 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001314842 (1)	348 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001314838 (1)	332 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073797746 (1)	371 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073797747 (1)	351 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI15261 (1)	965 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI54245 (1)	965 aa	Select Tool ZFIN BLAST NCBI BLAST

CH211-147G22 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] anpepb.1 (20)	RNA	RefSeq:NM_001089325	3304	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01000306	3909	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC115260	3304	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC154244	3294	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000025		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:CR339041	149533	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:BX572619	64564	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A4FUN4	965	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001082794	965	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI54245	965	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI15261	965	Select Tool ZFIN BLAST NCBI BLAST
[GENE] mhc1lda (10)	RNA	RefSeq:NM_001327909	1604	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01024848	1312	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CK017890	931	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000025		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:CR339041	149533	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR854891	135337	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:F1RAH3	332	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001314838	332	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] mhc1lfa (9)	RNA	RefSeq:XM_073941646	2708	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001327913	1951	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_073941645	1172	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01002616	1086	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EH466711	827	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EH440805	765	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01019914	691	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000025		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:CR339041	149533	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0AC58IU49	371	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0AC58IU37	351	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M1P987	348	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_073797746	371	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_073797747	351	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001314842	348	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] mhc1lja (5)	RNA	RefSeq:NM_001327918	1164	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01042990	685	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:JBMGRA010000025		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:CR339041	149533	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:X1WF83	357	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001314847	357	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] si:ch211-147g22.4 (3)	Genomic	GenBank:JBMGRA010000025		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl