Genomic Feature

wz23

ID
ZDB-ALT-220120-2
Name
wz23
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Levkowitz Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 63507746 - 63509611 (GRCz11) (1) Details
Nucleotide change
TGGAAGAAGTGGTTTTGCTCCATTGATGTCAGTCATATCAATAATCTCTACTTTGACACCTCTAGGGTCCTAAAGTGAAACATAACATCTTAGAAATCATAGTTCATGAGTCGAATAAATCTGTGAAGAGAAAACCCCACCTGGAATGTAAGAGTGACGGTTCGTGCAGATTTCCTCAGCTCCTCGTTGAGGGAGTAAACACGCACTTGTACTAAAGAAAACAAACCCAAATTTTGAGGTGATTTTTACAAATTTGTTCAGATATAATATTTAAATTTATAATATTATTATTACATTACATTACATTAATATAATAATAATATAATATTTATTTTATATTAAATAATATTTAATTACATTAAATTGTATTTGGTTGACTCTCACCATACAAAATATGTTAGAAAACAATGTTATATATAGTTTATTGGTTACTTCTATTTATTCGTTTAATTTATTTCTTTTCATTTTATTTATTTACTTCTATTTCAATTCATTTATTTCTATCTAGATATACTTCTAGAGTTTATATCTCTACATATTTATTGGGGGGCCCCAGAATTCATGTGGCCCTATAAGCGGCCCCTAGTTCTGAGTCAAAAACGTAACATGTCATGGGGCTTCAGTCACATGATCCTGAATGGAGTCCTACAACTAGCTAATTAAAGGTTTCCGTGGAATTGCACCATTTAAAATTAACATGCAGTGTCATTCCAGAAGACATGGTTTTCAGACAATATGTAAAACGTCTCTGTGTTCTATATGGATTAAATAATAATTTCCATTTAGGCTACTAATAAAATAACCTCTCATAAAAATTAGGCCTGGTGTAGTCTATTTATTAATGATTTTGCGATTTATAAGAGTTGCAATTTAAACTATGCTTGAGACAGACACACCAAATGGCGGATGTGTGATTTATCTCAAAAAAGGTACCAACACAGTTTTATAACAAGAGGTCCATGAAAGACAAAGAAATGTTTAACAATTGACTACCTTTTTAGATGATAATATTAATTAGGCTATATTCACTTTTGTCATGTGTGATAGTGAAAATGCAACGTTGTGTCCAGCCTGATCTCACGAGAAAACGTAAGTATTTTACGTTTTGCCATGTCAACACAACCCATATGCACATGATATTATGGTACTGACCTTCTTGTTCGGGTGTATAAAGCGGTTTGTCAGTCTGGATAAAGAGAAAACCATTGACTGTAGTGACCGGGATTTTAACATTATCAGTGAAAGCAGAAGAAATCGTCTGAAGGTAGACAGATGTGTCCTCCTTGGGGAAATCTTTTGCTAATATCTGTGAAAAGGAAAATGGAAGAACAGCCATTCCTTATAAGATATTTTAAAAAGAGTTTTATATACAAGTCAACACCATTAAATGTGCAGAATTTACCCGTAAAGTCGCTGAAGCTTGATAGTTATTCGCGGCGTTGAGCTTCAGGGATTGATAGTCATATTCTTTATTGCCTACTGCTAACGTGTTCTTCAGGTGCAGATGAACTGTAGTTTCCTGATCAAAACCAAACAACTGCACGACAACAGTTTCTGAGGCATCGAGCCGCAGGACTTTAGGTGCAGTAATTAGGTATCTAGAAAACAAGACATTTAGCTTATGTGACATATAAAATGTTTCTTAAAATGTCATTTTAATTCACATATAACCTACTTTTATGTTTGATAAACATTTCTTCCCCCCTCCAGCTTTTTGATAACACATTTCATCACTCAAAGAAGAATTTAAATGATGTAAATTGTTACTTACACATTTTCCTGAACGGTGAAGCAGACAAACAGATTAAATATGCAGAACAATAATAATCGTGCCATTATAGACTGTTTGCTTCATGGGAATAAAAC/-
Variant Notes
Two gRNAs were designed for each gene that was targeted, one upstream of the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1866 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTTTTCAACTGAATTTCAACTTTCTTTGTCTGACAACTGCACGTTAGAAACAAATAAATGTTTAAGAAATCCATGTCACTATAAGGTATGTATAAAATATTTTGAAACGTTTGTGTTTTGCTACATATTTAGTTTCAAATGTGAGTGTACTTTTATTAAAAAAGGAAAAAAAATCCTGTTGGACTCATGTAAAGTTTATTTTAAGTACTTATCTTCTATGCATATGTGAATTTTTAGTACTAAGTAATTAAATTGCTTATTGGGTAATCAGAAAAAAATTAATCACAAAAATCATTTAAATGCATTTTAATTATTGTAATTAGGCTCTACTCAACATTGCCTACCACAATCCAGTATGAAAGAGATTTAATTTGTGAGAAAGCTGATCTTTTCAGCACTATATATCATCACTATTATTTAAAGCACTTAATAAAGCATCAGATTAATCCAGGAAGAATAGTACATGTGACTTACATTGGCTTTAAAGGTATTTTGAATGG
TGGAAGAAGTGGTTTTGCTCCATTGATGTCAGTCATATCAATAATCTCTACTTTGACACCTCTAGGGTCCTAAAGTGAAACATAACATCTTAGAAATCATAGTTCATGAGTCGAATAAATCTGTGAAGAGAAAACCCCACCTGGAATGTAAGAGTGACGGTTCGTGCAGATTTCCTCAGCTCCTCGTTGAGGGAGTAAACACGCACTTGTACTAAAGAAAACAAACCCAAATTTTGAGGTGATTTTTACAAATTTGTTCAGATATAATATTTAAATTTATAATATTATTATTACATTACATTACATTAATATAATAATAATATAATATTTATTTTATATTAAATAATATTTAATTACATTAAATTGTATTTGGTTGACTCTCACCATACAAAATATGTTAGAAAACAATGTTATATATAGTTTATTGGTTACTTCTATTTATTCGTTTAATTTATTTCTTTTCATTTTATTTATTTACTTCTATTTCAATTCATTTATTTCTATCTAGATATACTTCTAGAGTTTATATCTCTACATATTTATTGGGGGGCCCCAGAATTCATGTGGCCCTATAAGCGGCCCCTAGTTCTGAGTCAAAAACGTAACATGTCATGGGGCTTCAGTCACATGATCCTGAATGGAGTCCTACAACTAGCTAATTAAAGGTTTCCGTGGAATTGCACCATTTAAAATTAACATGCAGTGTCATTCCAGAAGACATGGTTTTCAGACAATATGTAAAACGTCTCTGTGTTCTATATGGATTAAATAATAATTTCCATTTAGGCTACTAATAAAATAACCTCTCATAAAAATTAGGCCTGGTGTAGTCTATTTATTAATGATTTTGCGATTTATAAGAGTTGCAATTTAAACTATGCTTGAGACAGACACACCAAATGGCGGATGTGTGATTTATCTCAAAAAAGGTACCAACACAGTTTTATAACAAGAGGTCCATGAAAGACAAAGAAATGTTTAACAATTGACTACCTTTTTAGATGATAATATTAATTAGGCTATATTCACTTTTGTCATGTGTGATAGTGAAAATGCAACGTTGTGTCCAGCCTGATCTCACGAGAAAACGTAAGTATTTTACGTTTTGCCATGTCAACACAACCCATATGCACATGATATTATGGTACTGACCTTCTTGTTCGGGTGTATAAAGCGGTTTGTCAGTCTGGATAAAGAGAAAACCATTGACTGTAGTGACCGGGATTTTAACATTATCAGTGAAAGCAGAAGAAATCGTCTGAAGGTAGACAGATGTGTCCTCCTTGGGGAAATCTTTTGCTAATATCTGTGAAAAGGAAAATGGAAGAACAGCCATTCCTTATAAGATATTTTAAAAAGAGTTTTATATACAAGTCAACACCATTAAATGTGCAGAATTTACCCGTAAAGTCGCTGAAGCTTGATAGTTATTCGCGGCGTTGAGCTTCAGGGATTGATAGTCATATTCTTTATTGCCTACTGCTAACGTGTTCTTCAGGTGCAGATGAACTGTAGTTTCCTGATCAAAACCAAACAACTGCACGACAACAGTTTCTGAGGCATCGAGCCGCAGGACTTTAGGTGCAGTAATTAGGTATCTAGAAAACAAGACATTTAGCTTATGTGACATATAAAATGTTTCTTAAAATGTCATTTTAATTCACATATAACCTACTTTTATGTTTGATAAACATTTCTTCCCCCCTCCAGCTTTTTGATAACACATTTCATCACTCAAAGAAGAATTTAAATGATGTAAATTGTTACTTACACATTTTCCTGAACGGTGAAGCAGACAAACAGATTAAATATGCAGAACAATAATAATCGTGCCATTATAGACTGTTTGCTTCATGGGAATAAAAC/- AGAGGTCGGGAATTCGGTCAGTTTCAGTAAACCGAATCAATAGGCTTATCTGTGCTTGTTTTAAGTTACTTATTAGCTCA  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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