Genomic Feature
ecn2
- ID
- ZDB-ALT-190830-5
- Name
- ecn2
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Zhen-Yu Du Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 8349137 - 8349141 (GRCz11) (1) Details
- Nucleotide change
- TATGC/-
- Variant Notes
-
exon 2 deletion of TATGC at 78bp , premature stop codon at amino acid 82aa
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 2 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTTCTATCTATCTATCTATCTATCTATCTATCCATCCATCTATCTATCTATCTATCTAGCTATATTATTCCATCCATCCATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACTAGCTATCTATCTAATGAAAGTCATCTTTTTCTTGTTTTGAGCAGAACAGTGTTCTGACCGGTGTTTACCCTGCCAGTCCTTCAAGCTGGTTATTTGTAGTTATTGCTATAATGAGCACCATG
TATGC/- CAGGATCGACCCCTCCATGGGCACGATTGATAAAATCAAGACATCTCTACCAGTGAGGTAAATTAACAGCAGATCTATGAAAGATCTATGTTAGATAAAAACAGATGCATAAAGCTGGGAACATGGATGATTAGTGCATAAAATACCCGTGTAGATGGCATGCAAATGATTTTTAAACTGATTTTTGTATTTATAATGTATAATAAGTTAAAATTCTGATAAAGAGAAAACATTTAGGCAGTGAATATCAGTGTTTTGTTAAGGATTGTAGGTCTTGGACCACATCATTTTGCCTGATATGTTTGATCAAAAATATAAATACAACTGATATTACCAGTTCTCGGTACTGATTGGGCAACACATATATTTTATTTACTGTTAAGCAATGGATTTGGCAGCTTCGGTTTCTATTTACAGATTCATTCAGTTGAATTTGTGCTTCATCAGATGAAGCACGTTACACATTGAAATAATTTTTTGCCAACTACTCAGTCAGGGAC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None