Genomic Feature

tpu1

ID
ZDB-ALT-190809-1
Name
tpu1
Synonyms
  • uta145 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Rämet Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 14: 16345318 - 16345322 (GRCz11) (1) Details
Nucleotide change
GCATC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GGATGTAATGTTCCACAACAAACTAAGATAAGTTGCTGAAAATTAAACAGACTTGATGACGGTGTGCTGGCATTTCAGTAATGGGCATTTCCAGCCTTGGGTTTATTTAGTGATTACACACTGAACCAGTGTTGCACAACATGTTAGTTTTACTCCAAATACAAGCTTGGATGAGAGATAAAAGCTGCACACAGTCAGACTGAAGAGAAAAGAGAATTAACACAACAATCTTTATCTTAATCGAAAGTAGACAAGAAATATGCTGCGCTGCCTGTTTGTCTTCGTGTGCCTTTTGCACACAAGTATGTAAACTATGATTATCAATATGGATTTTTGAAGTTCTCATAAACGTAAATGAATAGTGTATTTATGTAAGAGTCATATCTCTGTCTTGTTGCCCACAGTGCTTGGTGTTATGGGAGCTGTCACTCCAAAGCCAATTATTATCAACGGCACCTACATAAACCCAGAATTAGGCAAGTATCATGCTAGGTTGAGGA
GCATC/- GCTCGGAGCTGCCTGCAAATCAAAAAAAATCATGGTGCAACACAGGGTGAGTATTGTGGGAATTTAATTTATTTAATATTTAGATTAAAGTTAGGTTTCGGTGCTGAATGGTTGATCAACCACTCAAAAATACAACAAGATATTAACTTTAATCTCACTGTAAAAAAAAAAAAAACTGTTATTTTAAAAATTTTTTACAGAAATTTATTGTAAAATAACACACATTAAATTACAGAAATTTACCGTACAATAAAAAACAAGGAAAGGTAAAGATAAAATTTAAGGTAAATTTCTGTAATTTAACGGCTGTTATTTTACAATAAATTTCTCTAATTTAACTGCCGTTATTTCACAATAAATTTCTGTAATTTTGTTTTATGTTTTTTTCTGCCACCCCAGCTTTTTTACAGTAAAAAATGGAGTGAGATTTGGTAACCTTTTGGATTAGGCTCCTGTGTGTCATGATCTTTAAATTCTTTTTAGATATACAAAGGTGGTGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations