Genomic Feature

ya2188

ID
ZDB-ALT-160707-7
Name
ya2188
Synonyms
  • cntnap2aD25 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Giraldez Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 17871727 - 17871751 (GRCz11) (1) Details
Nucleotide change
CCAGATGTTGCCATCTTGATGGTAT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
25 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AATAGTAGATTTAGAATTCTGGTAGTTCCATAGTTAAAATGATTTGGTTTCAATGGTCAATATAAAGACAGGTTGAGTTTAGAATTTAGTTTGAGGTACTATTATTTGGGTGGCACGGTCTTTTTAGTTTATAAAAAAGAAACCTAATGCATCCACACCATCACTGTCAATATAATTCACAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATTTTATTTATTTGTTTATTTTTAAATTCCAATTTCTAATTTATTTATATTATTTAACTTCAAAAAAGTTTTTACCTTGCTTGTGCAGAAAAGGGGCTAAATTAAAAATAACAAAGATGGAAACTCATTTGCTGAATAAACTCCTACATAGAACATTACATCCATGTACAAGTGAACAAACATTCATATCCTAATCATAACTTTTTGCATGCACTATATTAATACTCAC
CCAGATGTTGCCATCTTGATGGTAT/- GGTTTCCAGTTTCTTCCTGTGTCACTATAGAGCAGCCGGTATCGTGTTGTCCAATCAGAACTGCTATATCGACCCTGTGTGGCGACGGCTGTGACCTGTTTTCTGCTTCCCAGGTCGACCTGCAGCCACTGGTAATGATCACTGTCCAGCGGAGACCAGCCCCCAGCACCTACAGAAACAGCACCATACTCAGTATCTTGTTGTATTGATCTAAAATCTTTGTGGTCTTGTCACACAGGGGTTAGAGAAGAACACAGCAGGAGTAGCTGTCTGTTCACAGTAAATATTACGTGTTCTTTTATCAATTTTAAGGGTATTCATTTAAAGGGTCATGTACTACAGGATAACCTGCAGAAGATGTACAATTTACAGGGATCTGCTGATGTTTGGTAAACTGAATGTTCAAGAGGAACATCTGTGTTATTACTGTATGTTCTCGCTTCTCCAGAAAAGTCTTGGGAACAGATTGTCTTACAGATGTTTTATCTGTGCTTTTAGCC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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